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| Gene Spring |
The GeneSpring microarray analysis software comes from Silicon
Genetics and is being widely used here at Wayne State and across
the Michigan Life Sciences Corridor.
GeneSpring is available from computers maintained at the AGTC.
To learn more about GeneSpring, visit: http://sigenetics.com
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| Celera |
The
Celera Discovery System (CDS) is an easy to use desktop
resource. This unified platform provides comprehensive, regularly-updated
mouse and human genome data from proprietary and public sources-integrated,
aggregated, validated, curated and classified along with analysis
tools and super-computing power. Access is web-based and controlled with
a floating license.
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| GCOS / Affy MicroArray
Suite |
The software automatically acquires and processes hybridization
data. Analysis algorithms allow review, comparing, graphing,
filtering, and reporting in different modes. This software is available
on computers maintained at the AGTC and can be installed on-site.
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| Affy Data Mining
Tool |
Used to filter and sort data stored in an Affymetrix Analysis
Data Model compatible database. This software is available on
computers maintained at the AGTC.
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| R and BioConductor |
Bioconductor is an open source and open development software
project to provide tools for the analysis and comprehension
of genomic data. Visit the BioConductor
website to learn more. R and BioConductor are able on high performance linux cluster and can be
used at the AGTC and off site.
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| MacVector |
MacVector, the leading sequence analysis package for the Macintosh,
provides sequence editing, PCR primer analysis, Internet database
searches, protein analysis, and a wide variety of other functions.
Visit Accelrys
to learn more about MacVector. This software is available on
a campus-wide floating license.
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| DS Gene |
DS Gene is a versatile sequence analysis software program for
the Windows platform. Visit Accelrys
to learn more. DS Gene is avaialable on computers maintained at the AGTC.
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| ImaGene |
ImaGene automates the time consuming process of measuring and
visualizing gene expression data from high-density array images.
Visit BioDiscovery
to learn more about ImaGene. ImaGene is available on computers
maintained at the AGTC.
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| Gene Pix Pro |
GenePix is a leader in the acquisition and analysis of expression
data from DNA microarrays, protein microarrays, tissue arrays
and cell arrays. GenePix is available on computers maintained at the
AGTC.
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| Genomatix |
The Genomatix
Bioinformatics tools can be used to solve various problems
in the characterization of regulatory networks and target genes.
Genomatix is available from a web-browser on a floating license.
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| Oligo |
OLIGO performs a range of functions for researchers in PCR and
related technologies; consensus, multiplex and degenerate primers,
oligonucleotide database, secondary structure, LCR and more.
You can learn more about Oligo
here.
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